Cluster: HRGMv2_3286_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3286
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3286_1 | HRGMv2_3286_1_503 | 523355 | 524455 | - | GT28 |
| TC | HRGMv2_3286_1 | HRGMv2_3286_1_504 | 524452 | 525726 | - | 2.A.103.1.4 |
| pfam | HRGMv2_3286_1 | HRGMv2_3286_1_505 | 525742 | 527211 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3286_1 | HRGMv2_3286_1_506 | 527208 | 528278 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3286_1_503
Type: CAZyme
Location: 523355 - 524455 (-)
Type: CAZyme
Location: 523355 - 524455 (-)
Gene ID: HRGMv2_3286_1_504
Type: TC
Location: 524452 - 525726 (-)
Type: TC
Location: 524452 - 525726 (-)
Gene ID: HRGMv2_3286_1_505
Type: pfam
Location: 525742 - 527211 (-)
Type: pfam
Location: 525742 - 527211 (-)
Gene ID: HRGMv2_3286_1_506
Type: TC
Location: 527208 - 528278 (-)
Type: TC
Location: 527208 - 528278 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Propionibacteriaceae
Genus
Propionimicrobium
Species
Propionimicrobium lymphophilum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.