Cluster: HRGMv2_3286_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3286
- CGC Family ID: CGCFAM_00268
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3286_5 | HRGMv2_3286_5_111 | 123894 | 126020 | - | GH3 |
| pfam | HRGMv2_3286_5 | HRGMv2_3286_5_112 | 126051 | 126521 | - | CinA |
| TC | HRGMv2_3286_5 | HRGMv2_3286_5_113 | 126518 | 127189 | - | 4.F.1.1.7 |
| pfam | HRGMv2_3286_5 | HRGMv2_3286_5_114 | 127208 | 128596 | - | UPF0004 | Radical_SAM | TRAM_2 |
| TC | HRGMv2_3286_5 | HRGMv2_3286_5_115 | 128779 | 131259 | - | 3.A.12.1.1 |
Gene ID: HRGMv2_3286_5_111
Type: CAZyme
Location: 123894 - 126020 (-)
Type: CAZyme
Location: 123894 - 126020 (-)
Gene ID: HRGMv2_3286_5_112
Type: pfam
Location: 126051 - 126521 (-)
Type: pfam
Location: 126051 - 126521 (-)
Gene ID: HRGMv2_3286_5_113
Type: TC
Location: 126518 - 127189 (-)
Type: TC
Location: 126518 - 127189 (-)
Gene ID: HRGMv2_3286_5_114
Type: pfam
Location: 127208 - 128596 (-)
Type: pfam
Location: 127208 - 128596 (-)
Gene ID: HRGMv2_3286_5_115
Type: TC
Location: 128779 - 131259 (-)
Type: TC
Location: 128779 - 131259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Propionibacteriaceae
Genus
Propionimicrobium
Species
Propionimicrobium lymphophilum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.