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Cluster: HRGMv2_3286_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3286_1 HRGMv2_3286_1_83 90947 91783 - 3.A.1.24.5
TC HRGMv2_3286_1 HRGMv2_3286_1_84 91873 92529 - 3.A.1.24.5
TC HRGMv2_3286_1 HRGMv2_3286_1_85 92526 93215 - 3.A.1.24.1
STP HRGMv2_3286_1 HRGMv2_3286_1_86 93434 95002 - Pyr_redox_2
pfam HRGMv2_3286_1 HRGMv2_3286_1_87 95006 95569 - AhpC-TSA | Redoxin | 1-cysPrx_C
TC HRGMv2_3286_1 HRGMv2_3286_1_88 95755 96666 + 2.A.4.1.5
NULL(UNKNOWN) HRGMv2_3286_1 HRGMv2_3286_1_89 96787 97551 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_3286_1 HRGMv2_3286_1_90 97788 98810 + Peripla_BP_2
TC HRGMv2_3286_1 HRGMv2_3286_1_91 98820 99872 + 3.A.1.14.5
TC HRGMv2_3286_1 HRGMv2_3286_1_92 99874 100647 + 3.A.1.14.1
CAZyme HRGMv2_3286_1 HRGMv2_3286_1_93 100834 102039 + GH13_39
Gene ID: HRGMv2_3286_1_83
Type: TC
Location: 90947 - 91783 (-)
Gene ID: HRGMv2_3286_1_84
Type: TC
Location: 91873 - 92529 (-)
Gene ID: HRGMv2_3286_1_85
Type: TC
Location: 92526 - 93215 (-)
Gene ID: HRGMv2_3286_1_86
Type: STP
Location: 93434 - 95002 (-)
Gene ID: HRGMv2_3286_1_87
Type: pfam
Location: 95006 - 95569 (-)
Gene ID: HRGMv2_3286_1_88
Type: TC
Location: 95755 - 96666 (+)
Gene ID: HRGMv2_3286_1_89
Type:
Location: 96787 - 97551 (+)
Gene ID: HRGMv2_3286_1_90
Type: STP
Location: 97788 - 98810 (+)
Gene ID: HRGMv2_3286_1_91
Type: TC
Location: 98820 - 99872 (+)
Gene ID: HRGMv2_3286_1_92
Type: TC
Location: 99874 - 100647 (+)
Gene ID: HRGMv2_3286_1_93
Type: CAZyme
Location: 100834 - 102039 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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