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Cluster: HRGMv2_3285_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3285_1 HRGMv2_3285_1_421 557934 559004 - 3.A.1.5.37
TC HRGMv2_3285_1 HRGMv2_3285_1_422 558991 560019 - 3.A.1.5.35
TC HRGMv2_3285_1 HRGMv2_3285_1_423 560032 560994 - 3.A.1.5.35
TC HRGMv2_3285_1 HRGMv2_3285_1_424 560987 561910 - 3.A.1.5.35
TC HRGMv2_3285_1 HRGMv2_3285_1_425 561976 563637 - 3.A.1.5.37
peptidase HRGMv2_3285_1 HRGMv2_3285_1_426 563927 564463 - C56.UNW
pfam HRGMv2_3285_1 HRGMv2_3285_1_427 564984 565916 - Metallophos | Metallophos_2
CAZyme HRGMv2_3285_1 HRGMv2_3285_1_428 565916 568411 - GT51
Gene ID: HRGMv2_3285_1_421
Type: TC
Location: 557934 - 559004 (-)
Gene ID: HRGMv2_3285_1_422
Type: TC
Location: 558991 - 560019 (-)
Gene ID: HRGMv2_3285_1_423
Type: TC
Location: 560032 - 560994 (-)
Gene ID: HRGMv2_3285_1_424
Type: TC
Location: 560987 - 561910 (-)
Gene ID: HRGMv2_3285_1_425
Type: TC
Location: 561976 - 563637 (-)
Gene ID: HRGMv2_3285_1_426
Type: peptidase
Location: 563927 - 564463 (-)
Gene ID: HRGMv2_3285_1_427
Type: pfam
Location: 564984 - 565916 (-)
Gene ID: HRGMv2_3285_1_428
Type: CAZyme
Location: 565916 - 568411 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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