Cluster: HRGMv2_3285_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3285
- CGC Family ID: CGCFAM_05502
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3285_1 | HRGMv2_3285_1_246 | 322571 | 323359 | + | 3.A.1.125.3 |
| TC | HRGMv2_3285_1 | HRGMv2_3285_1_247 | 323359 | 325911 | + | 3.A.1.125.3 |
| NULL(UNKNOWN) | HRGMv2_3285_1 | HRGMv2_3285_1_248 | 326280 | 326786 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3285_1 | HRGMv2_3285_1_249 | 326765 | 328456 | - | FTHFS |
| TC | HRGMv2_3285_1 | HRGMv2_3285_1_250 | 328958 | 330316 | + | 2.A.1.21.16 |
| CAZyme | HRGMv2_3285_1 | HRGMv2_3285_1_251 | 330423 | 334268 | - | CBM50 | CBM50 |
Gene ID: HRGMv2_3285_1_246
Type: TC
Location: 322571 - 323359 (+)
Type: TC
Location: 322571 - 323359 (+)
Gene ID: HRGMv2_3285_1_247
Type: TC
Location: 323359 - 325911 (+)
Type: TC
Location: 323359 - 325911 (+)
Gene ID: HRGMv2_3285_1_248
Type:
Location: 326280 - 326786 (+)
Type:
Location: 326280 - 326786 (+)
Gene ID: HRGMv2_3285_1_249
Type: pfam
Location: 326765 - 328456 (-)
Type: pfam
Location: 326765 - 328456 (-)
Gene ID: HRGMv2_3285_1_250
Type: TC
Location: 328958 - 330316 (+)
Type: TC
Location: 328958 - 330316 (+)
Gene ID: HRGMv2_3285_1_251
Type: CAZyme
Location: 330423 - 334268 (-)
Type: CAZyme
Location: 330423 - 334268 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Propionibacteriaceae
Genus
Cutibacterium
Species
Cutibacterium granulosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.