Cluster: HRGMv2_3285_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3285
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3285_1 | HRGMv2_3285_1_184 | 228955 | 230088 | - | GT4 |
| pfam | HRGMv2_3285_1 | HRGMv2_3285_1_185 | 230088 | 231389 | - | UDPG_MGDP_dh | NAD_Gly3P_dh_N | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | HRGMv2_3285_1 | HRGMv2_3285_1_186 | 231615 | 232382 | + | 3.A.1.3.9 |
| TF | HRGMv2_3285_1 | HRGMv2_3285_1_187 | 232587 | 233348 | + | HTH_DeoR |
| STP | HRGMv2_3285_1 | HRGMv2_3285_1_188 | 233453 | 234517 | + | PfkB |
| TC | HRGMv2_3285_1 | HRGMv2_3285_1_189 | 234531 | 236645 | + | 4.A.2.1.13 |
| TC | HRGMv2_3285_1 | HRGMv2_3285_1_190 | 236702 | 236956 | + | 8.A.8.1.2 |
Gene ID: HRGMv2_3285_1_184
Type: CAZyme
Location: 228955 - 230088 (-)
Type: CAZyme
Location: 228955 - 230088 (-)
Gene ID: HRGMv2_3285_1_185
Type: pfam
Location: 230088 - 231389 (-)
Type: pfam
Location: 230088 - 231389 (-)
Gene ID: HRGMv2_3285_1_186
Type: TC
Location: 231615 - 232382 (+)
Type: TC
Location: 231615 - 232382 (+)
Gene ID: HRGMv2_3285_1_187
Type: TF
Location: 232587 - 233348 (+)
Type: TF
Location: 232587 - 233348 (+)
Gene ID: HRGMv2_3285_1_188
Type: STP
Location: 233453 - 234517 (+)
Type: STP
Location: 233453 - 234517 (+)
Gene ID: HRGMv2_3285_1_189
Type: TC
Location: 234531 - 236645 (+)
Type: TC
Location: 234531 - 236645 (+)
Gene ID: HRGMv2_3285_1_190
Type: TC
Location: 236702 - 236956 (+)
Type: TC
Location: 236702 - 236956 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Propionibacteriaceae
Genus
Cutibacterium
Species
Cutibacterium granulosum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.