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Cluster: HRGMv2_3285_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3285_2 HRGMv2_3285_2_476 543274 545520 + CBM48 | GH13_11
CAZyme HRGMv2_3285_2 HRGMv2_3285_2_477 545682 547784 + GH13_3
CAZyme HRGMv2_3285_2 HRGMv2_3285_2_478 547947 549776 + GH13_16
pfam HRGMv2_3285_2 HRGMv2_3285_2_479 549776 551116 + APH | Mak_N_cap
CAZyme HRGMv2_3285_2 HRGMv2_3285_2_480 551250 553163 + CBM48 | GH13_9
TC HRGMv2_3285_2 HRGMv2_3285_2_481 553331 555436 + 4.A.1.2.5
CAZyme HRGMv2_3285_2 HRGMv2_3285_2_482 555620 558124 - GH65
Gene ID: HRGMv2_3285_2_476
Type: CAZyme
Location: 543274 - 545520 (+)
Gene ID: HRGMv2_3285_2_477
Type: CAZyme
Location: 545682 - 547784 (+)
Gene ID: HRGMv2_3285_2_478
Type: CAZyme
Location: 547947 - 549776 (+)
Gene ID: HRGMv2_3285_2_479
Type: pfam
Location: 549776 - 551116 (+)
Gene ID: HRGMv2_3285_2_480
Type: CAZyme
Location: 551250 - 553163 (+)
Gene ID: HRGMv2_3285_2_481
Type: TC
Location: 553331 - 555436 (+)
Gene ID: HRGMv2_3285_2_482
Type: CAZyme
Location: 555620 - 558124 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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