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Cluster: HRGMv2_3285_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3285_2 HRGMv2_3285_2_102 114051 115295 - 2.A.79.1.3
pfam HRGMv2_3285_2 HRGMv2_3285_2_103 115411 116250 - DUF34_NIF3
pfam HRGMv2_3285_2 HRGMv2_3285_2_104 116263 117684 - Gln-synt_C | Gln-synt_N
CAZyme HRGMv2_3285_2 HRGMv2_3285_2_105 117822 119000 + GT4
pfam HRGMv2_3285_2 HRGMv2_3285_2_106 119149 119793 + VTT_dom
TC HRGMv2_3285_2 HRGMv2_3285_2_107 119934 121322 - 4.A.1.1.5
TF HRGMv2_3285_2 HRGMv2_3285_2_108 121637 122368 + GntR
pfam HRGMv2_3285_2 HRGMv2_3285_2_109 122365 122604 + PTS_EIIB
TC HRGMv2_3285_2 HRGMv2_3285_2_110 122759 122992 + 4.A.1.1.5
TC HRGMv2_3285_2 HRGMv2_3285_2_111 122985 123434 + 4.A.3.2.5
TC HRGMv2_3285_2 HRGMv2_3285_2_112 123439 125292 - 3.A.1.120.6
Gene ID: HRGMv2_3285_2_102
Type: TC
Location: 114051 - 115295 (-)
Gene ID: HRGMv2_3285_2_103
Type: pfam
Location: 115411 - 116250 (-)
Gene ID: HRGMv2_3285_2_104
Type: pfam
Location: 116263 - 117684 (-)
Gene ID: HRGMv2_3285_2_105
Type: CAZyme
Location: 117822 - 119000 (+)
Gene ID: HRGMv2_3285_2_106
Type: pfam
Location: 119149 - 119793 (+)
Gene ID: HRGMv2_3285_2_107
Type: TC
Location: 119934 - 121322 (-)
Gene ID: HRGMv2_3285_2_108
Type: TF
Location: 121637 - 122368 (+)
Gene ID: HRGMv2_3285_2_109
Type: pfam
Location: 122365 - 122604 (+)
Gene ID: HRGMv2_3285_2_110
Type: TC
Location: 122759 - 122992 (+)
Gene ID: HRGMv2_3285_2_111
Type: TC
Location: 122985 - 123434 (+)
Gene ID: HRGMv2_3285_2_112
Type: TC
Location: 123439 - 125292 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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