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Cluster: HRGMv2_3285_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3285_1 HRGMv2_3285_1_906 1121984 1123669 + 3.A.1.120.6
pfam HRGMv2_3285_1 HRGMv2_3285_1_907 1124050 1126917 - FAD_binding_4 | CCG | FAD-oxidase_C | Fer4_8 | Fer4_17
TF HRGMv2_3285_1 HRGMv2_3285_1_908 1127156 1127698 - MarR
TC HRGMv2_3285_1 HRGMv2_3285_1_909 1127909 1129762 + 4.C.1.1.14
pfam HRGMv2_3285_1 HRGMv2_3285_1_910 1129814 1130677 + 4HBT | 4HBT_2 | 4HBT_2 | Acyl-ACP_TE_C
sulfatase HRGMv2_3285_1 HRGMv2_3285_1_911 1130897 1131847 - S1_8
CAZyme HRGMv2_3285_1 HRGMv2_3285_1_912 1131885 1132802 - GH13_30
Gene ID: HRGMv2_3285_1_906
Type: TC
Location: 1121984 - 1123669 (+)
Gene ID: HRGMv2_3285_1_907
Type: pfam
Location: 1124050 - 1126917 (-)
Gene ID: HRGMv2_3285_1_908
Type: TF
Location: 1127156 - 1127698 (-)
Gene ID: HRGMv2_3285_1_909
Type: TC
Location: 1127909 - 1129762 (+)
Gene ID: HRGMv2_3285_1_910
Type: pfam
Location: 1129814 - 1130677 (+)
Gene ID: HRGMv2_3285_1_911
Type: sulfatase
Location: 1130897 - 1131847 (-)
Gene ID: HRGMv2_3285_1_912
Type: CAZyme
Location: 1131885 - 1132802 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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