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Cluster: HRGMv2_3282_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3282_4 HRGMv2_3282_4_90 95274 96305 + 2.A.56.1.9
pfam HRGMv2_3282_4 HRGMv2_3282_4_91 96340 96828 + DctQ
TC HRGMv2_3282_4 HRGMv2_3282_4_92 96831 98114 + 2.A.56.1.1
pfam HRGMv2_3282_4 HRGMv2_3282_4_93 98256 99083 + Transketolase_N | E1_dh | TPP_enzyme_C | DXP_synthase_N
pfam HRGMv2_3282_4 HRGMv2_3282_4_94 99083 100018 + Transket_pyr | Transketolase_C | Transketolase_C_1
TC HRGMv2_3282_4 HRGMv2_3282_4_95 100170 101699 + 2.A.25.1.2
pfam HRGMv2_3282_4 HRGMv2_3282_4_96 101943 102833 + Fic
CAZyme HRGMv2_3282_4 HRGMv2_3282_4_97 102988 105654 + GT2
Gene ID: HRGMv2_3282_4_90
Type: TC
Location: 95274 - 96305 (+)
Gene ID: HRGMv2_3282_4_91
Type: pfam
Location: 96340 - 96828 (+)
Gene ID: HRGMv2_3282_4_92
Type: TC
Location: 96831 - 98114 (+)
Gene ID: HRGMv2_3282_4_93
Type: pfam
Location: 98256 - 99083 (+)
Gene ID: HRGMv2_3282_4_94
Type: pfam
Location: 99083 - 100018 (+)
Gene ID: HRGMv2_3282_4_95
Type: TC
Location: 100170 - 101699 (+)
Gene ID: HRGMv2_3282_4_96
Type: pfam
Location: 101943 - 102833 (+)
Gene ID: HRGMv2_3282_4_97
Type: CAZyme
Location: 102988 - 105654 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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