Cluster: HRGMv2_3281_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3281
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3281_35 | HRGMv2_3281_35_3 | 6575 | 7966 | + | 2.A.25.1.3 |
| pfam | HRGMv2_3281_35 | HRGMv2_3281_35_4 | 8295 | 9749 | + | SSF |
| STP | HRGMv2_3281_35 | HRGMv2_3281_35_5 | 9949 | 12249 | + | Fer4 |
| CAZyme | HRGMv2_3281_35 | HRGMv2_3281_35_6 | 12327 | 13379 | + | CE1 |
| TC | HRGMv2_3281_35 | HRGMv2_3281_35_7 | 13355 | 14329 | - | 2.A.7.3.28 |
Gene ID: HRGMv2_3281_35_3
Type: TC
Location: 6575 - 7966 (+)
Type: TC
Location: 6575 - 7966 (+)
Gene ID: HRGMv2_3281_35_4
Type: pfam
Location: 8295 - 9749 (+)
Type: pfam
Location: 8295 - 9749 (+)
Gene ID: HRGMv2_3281_35_5
Type: STP
Location: 9949 - 12249 (+)
Type: STP
Location: 9949 - 12249 (+)
Gene ID: HRGMv2_3281_35_6
Type: CAZyme
Location: 12327 - 13379 (+)
Type: CAZyme
Location: 12327 - 13379 (+)
Gene ID: HRGMv2_3281_35_7
Type: TC
Location: 13355 - 14329 (-)
Type: TC
Location: 13355 - 14329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Alangreenwoodia
Species
Alangreenwoodia sp019420525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.