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Cluster: HRGMv2_3281_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3281_34 HRGMv2_3281_34_17 14693 16222 + 4.C.1.1.4
pfam HRGMv2_3281_34 HRGMv2_3281_34_18 16206 17027 + Acetyltransf_1 | Acetyltransf_7
pfam HRGMv2_3281_34 HRGMv2_3281_34_19 17134 17358 + PP-binding
TC HRGMv2_3281_34 HRGMv2_3281_34_20 17362 18777 + 2.A.50.2.1
CAZyme HRGMv2_3281_34 HRGMv2_3281_34_21 18922 20766 + CE4
pfam HRGMv2_3281_34 HRGMv2_3281_34_22 20885 21601 - Acyl-ACP_TE | Acyl-ACP_TE_C
pfam HRGMv2_3281_34 HRGMv2_3281_34_23 21662 22063 - Hpt
TC HRGMv2_3281_34 HRGMv2_3281_34_24 22060 23523 - 2.A.1.3.50
STP HRGMv2_3281_34 HRGMv2_3281_34_25 23860 25101 + Aminotran_1_2
TC HRGMv2_3281_34 HRGMv2_3281_34_26 25308 26372 + 2.A.98.1.4
pfam HRGMv2_3281_34 HRGMv2_3281_34_27 26502 27812 - LysM | LysM | LysM | LysM
STP HRGMv2_3281_34 HRGMv2_3281_34_28 27915 29174 + AAA
TC HRGMv2_3281_34 HRGMv2_3281_34_29 29299 29943 + 9.B.149.1.11
TC HRGMv2_3281_34 HRGMv2_3281_34_30 30035 32641 + 3.A.9.1.2
Gene ID: HRGMv2_3281_34_17
Type: TC
Location: 14693 - 16222 (+)
Gene ID: HRGMv2_3281_34_18
Type: pfam
Location: 16206 - 17027 (+)
Gene ID: HRGMv2_3281_34_19
Type: pfam
Location: 17134 - 17358 (+)
Gene ID: HRGMv2_3281_34_20
Type: TC
Location: 17362 - 18777 (+)
Gene ID: HRGMv2_3281_34_21
Type: CAZyme
Location: 18922 - 20766 (+)
Gene ID: HRGMv2_3281_34_22
Type: pfam
Location: 20885 - 21601 (-)
Gene ID: HRGMv2_3281_34_23
Type: pfam
Location: 21662 - 22063 (-)
Gene ID: HRGMv2_3281_34_24
Type: TC
Location: 22060 - 23523 (-)
Gene ID: HRGMv2_3281_34_25
Type: STP
Location: 23860 - 25101 (+)
Gene ID: HRGMv2_3281_34_26
Type: TC
Location: 25308 - 26372 (+)
Gene ID: HRGMv2_3281_34_27
Type: pfam
Location: 26502 - 27812 (-)
Gene ID: HRGMv2_3281_34_28
Type: STP
Location: 27915 - 29174 (+)
Gene ID: HRGMv2_3281_34_29
Type: TC
Location: 29299 - 29943 (+)
Gene ID: HRGMv2_3281_34_30
Type: TC
Location: 30035 - 32641 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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