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Cluster: HRGMv2_3281_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3281_16 HRGMv2_3281_16_103 109140 110225 - 3.A.1.140.1
pfam HRGMv2_3281_16 HRGMv2_3281_16_104 110430 111035 + 5-FTHF_cyc-lig
TC HRGMv2_3281_16 HRGMv2_3281_16_105 111147 112586 - 2.A.66.1.28
CAZyme HRGMv2_3281_16 HRGMv2_3281_16_106 112773 113807 - CE1
NULL(UNKNOWN) HRGMv2_3281_16 HRGMv2_3281_16_107 114014 114496 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3281_16 HRGMv2_3281_16_108 114499 116094 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3281_16 HRGMv2_3281_16_109 116087 116794 - 3.A.1.147.2
Gene ID: HRGMv2_3281_16_103
Type: TC
Location: 109140 - 110225 (-)
Gene ID: HRGMv2_3281_16_104
Type: pfam
Location: 110430 - 111035 (+)
Gene ID: HRGMv2_3281_16_105
Type: TC
Location: 111147 - 112586 (-)
Gene ID: HRGMv2_3281_16_106
Type: CAZyme
Location: 112773 - 113807 (-)
Gene ID: HRGMv2_3281_16_107
Type:
Location: 114014 - 114496 (+)
Gene ID: HRGMv2_3281_16_108
Type:
Location: 114499 - 116094 (-)
Gene ID: HRGMv2_3281_16_109
Type: TC
Location: 116087 - 116794 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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