Cluster: HRGMv2_3279_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3279
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3279_47 | HRGMv2_3279_47_3 | 2074 | 3177 | - | GT28 |
| TC | HRGMv2_3279_47 | HRGMv2_3279_47_4 | 3179 | 4327 | - | 2.A.103.1.3 |
| pfam | HRGMv2_3279_47 | HRGMv2_3279_47_5 | 4337 | 5692 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3279_47 | HRGMv2_3279_47_6 | 5704 | 6672 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3279_47_3
Type: CAZyme
Location: 2074 - 3177 (-)
Type: CAZyme
Location: 2074 - 3177 (-)
Gene ID: HRGMv2_3279_47_4
Type: TC
Location: 3179 - 4327 (-)
Type: TC
Location: 3179 - 4327 (-)
Gene ID: HRGMv2_3279_47_5
Type: pfam
Location: 4337 - 5692 (-)
Type: pfam
Location: 4337 - 5692 (-)
Gene ID: HRGMv2_3279_47_6
Type: TC
Location: 5704 - 6672 (-)
Type: TC
Location: 5704 - 6672 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Species
Lentihominibacter sp958448635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.