Cluster: HRGMv2_3279_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3279
- CGC Family ID: CGCFAM_03957
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3279_17 | HRGMv2_3279_17_18 | 17781 | 18734 | + | 2.A.19.5.2 |
| CAZyme | HRGMv2_3279_17 | HRGMv2_3279_17_19 | 18950 | 20080 | - | GH3 |
| TC | HRGMv2_3279_17 | HRGMv2_3279_17_20 | 20120 | 20758 | - | 3.A.1.25.5 |
| TF | HRGMv2_3279_17 | HRGMv2_3279_17_21 | 20763 | 21740 | - | HTH_11 |
| TC | HRGMv2_3279_17 | HRGMv2_3279_17_22 | 22004 | 23743 | + | 3.A.1.135.7 |
| TC | HRGMv2_3279_17 | HRGMv2_3279_17_23 | 23743 | 25560 | + | 3.A.1.135.6 |
Gene ID: HRGMv2_3279_17_18
Type: TC
Location: 17781 - 18734 (+)
Type: TC
Location: 17781 - 18734 (+)
Gene ID: HRGMv2_3279_17_19
Type: CAZyme
Location: 18950 - 20080 (-)
Type: CAZyme
Location: 18950 - 20080 (-)
Gene ID: HRGMv2_3279_17_20
Type: TC
Location: 20120 - 20758 (-)
Type: TC
Location: 20120 - 20758 (-)
Gene ID: HRGMv2_3279_17_21
Type: TF
Location: 20763 - 21740 (-)
Type: TF
Location: 20763 - 21740 (-)
Gene ID: HRGMv2_3279_17_22
Type: TC
Location: 22004 - 23743 (+)
Type: TC
Location: 22004 - 23743 (+)
Gene ID: HRGMv2_3279_17_23
Type: TC
Location: 23743 - 25560 (+)
Type: TC
Location: 23743 - 25560 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Species
Lentihominibacter sp958448635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.