Cluster: HRGMv2_3255_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3255
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3255_24 | HRGMv2_3255_24_5 | 3540 | 5279 | + | 3.A.1.117.3 |
| TF | HRGMv2_3255_24 | HRGMv2_3255_24_6 | 5633 | 6454 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_3255_24 | HRGMv2_3255_24_7 | 6667 | 8136 | + | 2.A.3.7.4 |
| CAZyme | HRGMv2_3255_24 | HRGMv2_3255_24_8 | 8311 | 10380 | + | GH42 |
Gene ID: HRGMv2_3255_24_5
Type: TC
Location: 3540 - 5279 (+)
Type: TC
Location: 3540 - 5279 (+)
Gene ID: HRGMv2_3255_24_6
Type: TF
Location: 5633 - 6454 (-)
Type: TF
Location: 5633 - 6454 (-)
Gene ID: HRGMv2_3255_24_7
Type: TC
Location: 6667 - 8136 (+)
Type: TC
Location: 6667 - 8136 (+)
Gene ID: HRGMv2_3255_24_8
Type: CAZyme
Location: 8311 - 10380 (+)
Type: CAZyme
Location: 8311 - 10380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Terrisporobacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.