Cluster: HRGMv2_3255_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3255
- CGC Family ID: CGCFAM_00763
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3255_7 | HRGMv2_3255_7_27 | 29078 | 30934 | - | 3.A.1.135.6 |
| TC | HRGMv2_3255_7 | HRGMv2_3255_7_28 | 30927 | 33230 | - | 3.A.1.135.6 |
| TF | HRGMv2_3255_7 | HRGMv2_3255_7_29 | 33260 | 33727 | - | MarR |
| NULL(UNKNOWN) | HRGMv2_3255_7 | HRGMv2_3255_7_30 | 34095 | 34820 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3255_7 | HRGMv2_3255_7_31 | 34893 | 36233 | - | CBM50 | GH25 |
Gene ID: HRGMv2_3255_7_27
Type: TC
Location: 29078 - 30934 (-)
Type: TC
Location: 29078 - 30934 (-)
Gene ID: HRGMv2_3255_7_28
Type: TC
Location: 30927 - 33230 (-)
Type: TC
Location: 30927 - 33230 (-)
Gene ID: HRGMv2_3255_7_29
Type: TF
Location: 33260 - 33727 (-)
Type: TF
Location: 33260 - 33727 (-)
Gene ID: HRGMv2_3255_7_30
Type:
Location: 34095 - 34820 (+)
Type:
Location: 34095 - 34820 (+)
Gene ID: HRGMv2_3255_7_31
Type: CAZyme
Location: 34893 - 36233 (-)
Type: CAZyme
Location: 34893 - 36233 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Terrisporobacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.