Cluster: HRGMv2_3255_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: HRGMv2_3255
- CGC Family ID: CGCFAM_00004
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3255_7 | HRGMv2_3255_7_3 | 1833 | 3737 | - | GH13_39 |
| CAZyme | HRGMv2_3255_7 | HRGMv2_3255_7_4 | 3709 | 6165 | - | GT35 |
| CAZyme | HRGMv2_3255_7 | HRGMv2_3255_7_5 | 6178 | 7617 | - | GT5 |
| pfam | HRGMv2_3255_7 | HRGMv2_3255_7_6 | 7641 | 8771 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_3255_7 | HRGMv2_3255_7_7 | 8788 | 9936 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_3255_7 | HRGMv2_3255_7_8 | 10002 | 11753 | - | GH13_9 |
| TC | HRGMv2_3255_7 | HRGMv2_3255_7_9 | 12230 | 13183 | - | 8.A.21.2.1 |
Gene ID: HRGMv2_3255_7_3
Type: CAZyme
Location: 1833 - 3737 (-)
Type: CAZyme
Location: 1833 - 3737 (-)
Gene ID: HRGMv2_3255_7_4
Type: CAZyme
Location: 3709 - 6165 (-)
Type: CAZyme
Location: 3709 - 6165 (-)
Gene ID: HRGMv2_3255_7_5
Type: CAZyme
Location: 6178 - 7617 (-)
Type: CAZyme
Location: 6178 - 7617 (-)
Gene ID: HRGMv2_3255_7_6
Type: pfam
Location: 7641 - 8771 (-)
Type: pfam
Location: 7641 - 8771 (-)
Gene ID: HRGMv2_3255_7_7
Type: pfam
Location: 8788 - 9936 (-)
Type: pfam
Location: 8788 - 9936 (-)
Gene ID: HRGMv2_3255_7_8
Type: CAZyme
Location: 10002 - 11753 (-)
Type: CAZyme
Location: 10002 - 11753 (-)
Gene ID: HRGMv2_3255_7_9
Type: TC
Location: 12230 - 13183 (-)
Type: TC
Location: 12230 - 13183 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Terrisporobacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.