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Cluster: HRGMv2_3255_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3255_6 HRGMv2_3255_6_21 22799 24190 + 2.A.8.1.6
CAZyme HRGMv2_3255_6 HRGMv2_3255_6_22 24240 25010 - CE4
TC HRGMv2_3255_6 HRGMv2_3255_6_23 25159 26442 - 2.A.1.23.2
TC HRGMv2_3255_6 HRGMv2_3255_6_24 26833 28644 + 5.A.1.6.1
TF HRGMv2_3255_6 HRGMv2_3255_6_25 28680 29375 + Trans_reg_C
STP HRGMv2_3255_6 HRGMv2_3255_6_26 29380 30768 + HATPase_c | HisKA
TC HRGMv2_3255_6 HRGMv2_3255_6_27 31196 32122 + 3.A.1.5.2
TC HRGMv2_3255_6 HRGMv2_3255_6_28 32141 33151 + 3.A.1.5.2
TC HRGMv2_3255_6 HRGMv2_3255_6_29 33166 34176 + 3.A.1.5.2
TC HRGMv2_3255_6 HRGMv2_3255_6_30 34180 35157 + 3.A.1.5.20
TC HRGMv2_3255_6 HRGMv2_3255_6_31 35214 36833 + 3.A.1.5.2
Gene ID: HRGMv2_3255_6_21
Type: TC
Location: 22799 - 24190 (+)
Gene ID: HRGMv2_3255_6_22
Type: CAZyme
Location: 24240 - 25010 (-)
Gene ID: HRGMv2_3255_6_23
Type: TC
Location: 25159 - 26442 (-)
Gene ID: HRGMv2_3255_6_24
Type: TC
Location: 26833 - 28644 (+)
Gene ID: HRGMv2_3255_6_25
Type: TF
Location: 28680 - 29375 (+)
Gene ID: HRGMv2_3255_6_26
Type: STP
Location: 29380 - 30768 (+)
Gene ID: HRGMv2_3255_6_27
Type: TC
Location: 31196 - 32122 (+)
Gene ID: HRGMv2_3255_6_28
Type: TC
Location: 32141 - 33151 (+)
Gene ID: HRGMv2_3255_6_29
Type: TC
Location: 33166 - 34176 (+)
Gene ID: HRGMv2_3255_6_30
Type: TC
Location: 34180 - 35157 (+)
Gene ID: HRGMv2_3255_6_31
Type: TC
Location: 35214 - 36833 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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