Cluster: HRGMv2_3255_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3255
- CGC Family ID: CGCFAM_00386
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3255_4 | HRGMv2_3255_4_40 | 38196 | 40442 | - | GH25 |
| TC | HRGMv2_3255_4 | HRGMv2_3255_4_41 | 40758 | 41525 | + | 3.A.1.134.12 |
| TC | HRGMv2_3255_4 | HRGMv2_3255_4_42 | 41515 | 43515 | + | 3.A.1.134.12 |
| TF | HRGMv2_3255_4 | HRGMv2_3255_4_43 | 43642 | 44313 | + | Trans_reg_C |
| STP | HRGMv2_3255_4 | HRGMv2_3255_4_44 | 44310 | 45320 | + | HATPase_c |
| CAZyme | HRGMv2_3255_4 | HRGMv2_3255_4_45 | 45428 | 46693 | - | GH25 |
Gene ID: HRGMv2_3255_4_40
Type: CAZyme
Location: 38196 - 40442 (-)
Type: CAZyme
Location: 38196 - 40442 (-)
Gene ID: HRGMv2_3255_4_41
Type: TC
Location: 40758 - 41525 (+)
Type: TC
Location: 40758 - 41525 (+)
Gene ID: HRGMv2_3255_4_42
Type: TC
Location: 41515 - 43515 (+)
Type: TC
Location: 41515 - 43515 (+)
Gene ID: HRGMv2_3255_4_43
Type: TF
Location: 43642 - 44313 (+)
Type: TF
Location: 43642 - 44313 (+)
Gene ID: HRGMv2_3255_4_44
Type: STP
Location: 44310 - 45320 (+)
Type: STP
Location: 44310 - 45320 (+)
Gene ID: HRGMv2_3255_4_45
Type: CAZyme
Location: 45428 - 46693 (-)
Type: CAZyme
Location: 45428 - 46693 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Terrisporobacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.