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Cluster: HRGMv2_3255_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3255_90 HRGMv2_3255_90_1 69 2483 + GH25
pfam HRGMv2_3255_90 HRGMv2_3255_90_2 2522 4441 - AAA_15 | AAA_21
TC HRGMv2_3255_90 HRGMv2_3255_90_3 4546 5790 - 2.A.40.1.4
STP HRGMv2_3255_90 HRGMv2_3255_90_4 5827 6357 - Pribosyltran
pfam HRGMv2_3255_90 HRGMv2_3255_90_5 6603 7514 - PseudoU_synth_2 | S4
TC HRGMv2_3255_90 HRGMv2_3255_90_6 7514 7966 - 9.B.105.1.5
CAZyme HRGMv2_3255_90 HRGMv2_3255_90_7 8067 8843 - CE4
Gene ID: HRGMv2_3255_90_1
Type: CAZyme
Location: 69 - 2483 (+)
Gene ID: HRGMv2_3255_90_2
Type: pfam
Location: 2522 - 4441 (-)
Gene ID: HRGMv2_3255_90_3
Type: TC
Location: 4546 - 5790 (-)
Gene ID: HRGMv2_3255_90_4
Type: STP
Location: 5827 - 6357 (-)
Gene ID: HRGMv2_3255_90_5
Type: pfam
Location: 6603 - 7514 (-)
Gene ID: HRGMv2_3255_90_6
Type: TC
Location: 7514 - 7966 (-)
Gene ID: HRGMv2_3255_90_7
Type: CAZyme
Location: 8067 - 8843 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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