Cluster: HRGMv2_3254_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3254
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3254_44 | HRGMv2_3254_44_5 | 3377 | 4642 | + | 3.A.1.1.2 |
| TC | HRGMv2_3254_44 | HRGMv2_3254_44_6 | 4701 | 5585 | + | 3.A.1.1.2 |
| TC | HRGMv2_3254_44 | HRGMv2_3254_44_7 | 5588 | 6430 | + | 3.A.1.1.2 |
| CAZyme | HRGMv2_3254_44 | HRGMv2_3254_44_8 | 6433 | 8103 | + | CBM34 | GH13_20 |
Gene ID: HRGMv2_3254_44_5
Type: TC
Location: 3377 - 4642 (+)
Type: TC
Location: 3377 - 4642 (+)
Gene ID: HRGMv2_3254_44_6
Type: TC
Location: 4701 - 5585 (+)
Type: TC
Location: 4701 - 5585 (+)
Gene ID: HRGMv2_3254_44_7
Type: TC
Location: 5588 - 6430 (+)
Type: TC
Location: 5588 - 6430 (+)
Gene ID: HRGMv2_3254_44_8
Type: CAZyme
Location: 6433 - 8103 (+)
Type: CAZyme
Location: 6433 - 8103 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Fimisoma
Species
Fimisoma sp900540145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3254_44_5 | vegetarian > vegan | 1.25676 | 0.00407 |
| HRGMv2_3254_44_6 | vegetarian > vegan | 1.11421 | 0.00407 |
| HRGMv2_3254_44_8 | omnivore > vegan | 3.43576 | 0.03749 |
| HRGMv2_3254_44_8 | vegetarian > vegan | 3.13931 | 0.00407 |