dbCAN Logo

Cluster: HRGMv2_3254_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3254_7 HRGMv2_3254_7_40 53455 54525 - 9.A.11.1.1
TC HRGMv2_3254_7 HRGMv2_3254_7_41 54535 55014 - 9.A.11.1.1
pfam HRGMv2_3254_7 HRGMv2_3254_7_42 55110 55688 + Maf
TC HRGMv2_3254_7 HRGMv2_3254_7_43 55813 56211 + 1.A.22.1.3
pfam HRGMv2_3254_7 HRGMv2_3254_7_44 56325 57830 + LytR_cpsA_psr
TF HRGMv2_3254_7 HRGMv2_3254_7_45 58107 58481 + HTH_3
TC HRGMv2_3254_7 HRGMv2_3254_7_46 58741 60579 + 9.B.18.2.1
STP HRGMv2_3254_7 HRGMv2_3254_7_47 60608 61828 + Aminotran_1_2
TC HRGMv2_3254_7 HRGMv2_3254_7_48 61825 62523 + 9.B.18.1.3
CAZyme HRGMv2_3254_7 HRGMv2_3254_7_49 62540 63766 + GT4
Gene ID: HRGMv2_3254_7_40
Type: TC
Location: 53455 - 54525 (-)
Gene ID: HRGMv2_3254_7_41
Type: TC
Location: 54535 - 55014 (-)
Gene ID: HRGMv2_3254_7_42
Type: pfam
Location: 55110 - 55688 (+)
Gene ID: HRGMv2_3254_7_43
Type: TC
Location: 55813 - 56211 (+)
Gene ID: HRGMv2_3254_7_44
Type: pfam
Location: 56325 - 57830 (+)
Gene ID: HRGMv2_3254_7_45
Type: TF
Location: 58107 - 58481 (+)
Gene ID: HRGMv2_3254_7_46
Type: TC
Location: 58741 - 60579 (+)
Gene ID: HRGMv2_3254_7_47
Type: STP
Location: 60608 - 61828 (+)
Gene ID: HRGMv2_3254_7_48
Type: TC
Location: 61825 - 62523 (+)
Gene ID: HRGMv2_3254_7_49
Type: CAZyme
Location: 62540 - 63766 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List