Cluster: HRGMv2_3253_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3253
- CGC Family ID: CGCFAM_01397
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3253_29 | HRGMv2_3253_29_6 | 5199 | 8318 | - | GT51 |
| TC | HRGMv2_3253_29 | HRGMv2_3253_29_7 | 9126 | 11255 | + | 3.A.11.1.1 |
| pfam | HRGMv2_3253_29 | HRGMv2_3253_29_8 | 11310 | 12371 | + | DNA_pol3_delta | DNA_pol3_delta_C |
| pfam | HRGMv2_3253_29 | HRGMv2_3253_29_9 | 12375 | 13298 | + | EamA | EamA |
| TC | HRGMv2_3253_29 | HRGMv2_3253_29_10 | 13298 | 15148 | + | 3.D.1.5.1 |
Gene ID: HRGMv2_3253_29_6
Type: CAZyme
Location: 5199 - 8318 (-)
Type: CAZyme
Location: 5199 - 8318 (-)
Gene ID: HRGMv2_3253_29_7
Type: TC
Location: 9126 - 11255 (+)
Type: TC
Location: 9126 - 11255 (+)
Gene ID: HRGMv2_3253_29_8
Type: pfam
Location: 11310 - 12371 (+)
Type: pfam
Location: 11310 - 12371 (+)
Gene ID: HRGMv2_3253_29_9
Type: pfam
Location: 12375 - 13298 (+)
Type: pfam
Location: 12375 - 13298 (+)
Gene ID: HRGMv2_3253_29_10
Type: TC
Location: 13298 - 15148 (+)
Type: TC
Location: 13298 - 15148 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Fimisoma
Species
Fimisoma sp900545135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.