Cluster: HRGMv2_3253_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3253
- CGC Family ID: CGCFAM_05440
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3253_28 | HRGMv2_3253_28_22 | 24766 | 25590 | + | CE4 |
| TF | HRGMv2_3253_28 | HRGMv2_3253_28_23 | 26335 | 26544 | + | HTH_3 |
| pfam | HRGMv2_3253_28 | HRGMv2_3253_28_24 | 26541 | 27344 | + | DUF3169 |
| TC | HRGMv2_3253_28 | HRGMv2_3253_28_25 | 27357 | 28331 | + | 3.A.1.144.3 |
Gene ID: HRGMv2_3253_28_22
Type: CAZyme
Location: 24766 - 25590 (+)
Type: CAZyme
Location: 24766 - 25590 (+)
Gene ID: HRGMv2_3253_28_23
Type: TF
Location: 26335 - 26544 (+)
Type: TF
Location: 26335 - 26544 (+)
Gene ID: HRGMv2_3253_28_24
Type: pfam
Location: 26541 - 27344 (+)
Type: pfam
Location: 26541 - 27344 (+)
Gene ID: HRGMv2_3253_28_25
Type: TC
Location: 27357 - 28331 (+)
Type: TC
Location: 27357 - 28331 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Fimisoma
Species
Fimisoma sp900545135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.