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Cluster: HRGMv2_3253_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3253_2 HRGMv2_3253_2_102 108913 110223 - 2.A.56.1.5
pfam HRGMv2_3253_2 HRGMv2_3253_2_103 110223 110798 - DctQ
TC HRGMv2_3253_2 HRGMv2_3253_2_104 110878 111897 - 2.A.56.2.1
TF HRGMv2_3253_2 HRGMv2_3253_2_105 112135 113520 - HTH_8
TC HRGMv2_3253_2 HRGMv2_3253_2_106 113513 115495 - 2.A.21.9.1
pfam HRGMv2_3253_2 HRGMv2_3253_2_107 115714 116055 - HIT | DcpS_C
pfam HRGMv2_3253_2 HRGMv2_3253_2_108 116055 117629 - UPF0004 | Radical_SAM | Radical_SAM
CAZyme HRGMv2_3253_2 HRGMv2_3253_2_109 118466 119410 + CE4
Gene ID: HRGMv2_3253_2_102
Type: TC
Location: 108913 - 110223 (-)
Gene ID: HRGMv2_3253_2_103
Type: pfam
Location: 110223 - 110798 (-)
Gene ID: HRGMv2_3253_2_104
Type: TC
Location: 110878 - 111897 (-)
Gene ID: HRGMv2_3253_2_105
Type: TF
Location: 112135 - 113520 (-)
Gene ID: HRGMv2_3253_2_106
Type: TC
Location: 113513 - 115495 (-)
Gene ID: HRGMv2_3253_2_107
Type: pfam
Location: 115714 - 116055 (-)
Gene ID: HRGMv2_3253_2_108
Type: pfam
Location: 116055 - 117629 (-)
Gene ID: HRGMv2_3253_2_109
Type: CAZyme
Location: 118466 - 119410 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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