Cluster: HRGMv2_3250_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3250
- CGC Family ID: CGCFAM_06212
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3250_61 | HRGMv2_3250_61_7 | 3904 | 5097 | - | GT1 |
| TF | HRGMv2_3250_61 | HRGMv2_3250_61_8 | 5090 | 5419 | - | SpoVT_AbrB |
| TC | HRGMv2_3250_61 | HRGMv2_3250_61_9 | 5514 | 7505 | + | 2.A.21.9.1 |
| TF | HRGMv2_3250_61 | HRGMv2_3250_61_10 | 7507 | 8877 | + | HTH_8 |
| TC | HRGMv2_3250_61 | HRGMv2_3250_61_11 | 9086 | 10513 | + | 2.A.35.1.1 |
| TC | HRGMv2_3250_61 | HRGMv2_3250_61_12 | 10535 | 12058 | + | 2.A.35.1.1 |
Gene ID: HRGMv2_3250_61_7
Type: CAZyme
Location: 3904 - 5097 (-)
Type: CAZyme
Location: 3904 - 5097 (-)
Gene ID: HRGMv2_3250_61_8
Type: TF
Location: 5090 - 5419 (-)
Type: TF
Location: 5090 - 5419 (-)
Gene ID: HRGMv2_3250_61_9
Type: TC
Location: 5514 - 7505 (+)
Type: TC
Location: 5514 - 7505 (+)
Gene ID: HRGMv2_3250_61_10
Type: TF
Location: 7507 - 8877 (+)
Type: TF
Location: 7507 - 8877 (+)
Gene ID: HRGMv2_3250_61_11
Type: TC
Location: 9086 - 10513 (+)
Type: TC
Location: 9086 - 10513 (+)
Gene ID: HRGMv2_3250_61_12
Type: TC
Location: 10535 - 12058 (+)
Type: TC
Location: 10535 - 12058 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
CAG-238
Species
CAG-238 sp900754805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.