dbCAN Logo

Cluster: HRGMv2_3250_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3250_43 HRGMv2_3250_43_6 3992 5752 + 9.B.106.2.2
pfam HRGMv2_3250_43 HRGMv2_3250_43_7 5770 6642 + MMR_HSR1 | RsgA_GTPase | RsgA_N
pfam HRGMv2_3250_43 HRGMv2_3250_43_8 6696 7340 + Ribul_P_3_epim
TC HRGMv2_3250_43 HRGMv2_3250_43_9 7359 8702 + 2.A.35.1.2
CAZyme HRGMv2_3250_43 HRGMv2_3250_43_10 8784 11861 - GT51
TC HRGMv2_3250_43 HRGMv2_3250_43_11 12082 14163 + 3.A.11.1.1
pfam HRGMv2_3250_43 HRGMv2_3250_43_12 14231 15289 + DNA_pol3_delta | DNA_pol3_delta_C
TC HRGMv2_3250_43 HRGMv2_3250_43_13 15293 16267 + 2.A.7.3.47
TC HRGMv2_3250_43 HRGMv2_3250_43_14 16248 18098 + 3.D.1.5.1
Gene ID: HRGMv2_3250_43_6
Type: TC
Location: 3992 - 5752 (+)
Gene ID: HRGMv2_3250_43_7
Type: pfam
Location: 5770 - 6642 (+)
Gene ID: HRGMv2_3250_43_8
Type: pfam
Location: 6696 - 7340 (+)
Gene ID: HRGMv2_3250_43_9
Type: TC
Location: 7359 - 8702 (+)
Gene ID: HRGMv2_3250_43_10
Type: CAZyme
Location: 8784 - 11861 (-)
Gene ID: HRGMv2_3250_43_11
Type: TC
Location: 12082 - 14163 (+)
Gene ID: HRGMv2_3250_43_12
Type: pfam
Location: 14231 - 15289 (+)
Gene ID: HRGMv2_3250_43_13
Type: TC
Location: 15293 - 16267 (+)
Gene ID: HRGMv2_3250_43_14
Type: TC
Location: 16248 - 18098 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List