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Cluster: HRGMv2_3250_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3250_22 HRGMv2_3250_22_30 23477 25420 - 4.C.1.1.4
TC HRGMv2_3250_22 HRGMv2_3250_22_31 25484 27205 - 9.A.11.1.1
pfam HRGMv2_3250_22 HRGMv2_3250_22_32 27831 29486 + tRNA-synt_1c | Anticodon_2
CAZyme HRGMv2_3250_22 HRGMv2_3250_22_33 29551 31530 - GH25
TC HRGMv2_3250_22 HRGMv2_3250_22_34 31527 33296 - 4.C.1.1.4
pfam HRGMv2_3250_22 HRGMv2_3250_22_35 33289 34227 - 2-oxoacid_dh
TC HRGMv2_3250_22 HRGMv2_3250_22_36 34380 36233 - 3.A.1.11.8
TC HRGMv2_3250_22 HRGMv2_3250_22_37 36230 36835 - 3.A.1.11.2
Gene ID: HRGMv2_3250_22_30
Type: TC
Location: 23477 - 25420 (-)
Gene ID: HRGMv2_3250_22_31
Type: TC
Location: 25484 - 27205 (-)
Gene ID: HRGMv2_3250_22_32
Type: pfam
Location: 27831 - 29486 (+)
Gene ID: HRGMv2_3250_22_33
Type: CAZyme
Location: 29551 - 31530 (-)
Gene ID: HRGMv2_3250_22_34
Type: TC
Location: 31527 - 33296 (-)
Gene ID: HRGMv2_3250_22_35
Type: pfam
Location: 33289 - 34227 (-)
Gene ID: HRGMv2_3250_22_36
Type: TC
Location: 34380 - 36233 (-)
Gene ID: HRGMv2_3250_22_37
Type: TC
Location: 36230 - 36835 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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