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Cluster: HRGMv2_3247_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3247_37 HRGMv2_3247_37_4 1279 2751 + GH25
pfam HRGMv2_3247_37 HRGMv2_3247_37_5 2939 3850 + AAA_5
NULL(UNKNOWN) HRGMv2_3247_37 HRGMv2_3247_37_6 3920 5740 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3247_37 HRGMv2_3247_37_7 5981 6367 + 1.A.22.1.3
TF HRGMv2_3247_37 HRGMv2_3247_37_8 6629 7150 + HTH_11
pfam HRGMv2_3247_37 HRGMv2_3247_37_9 7162 7926 + TatD_DNase
TC HRGMv2_3247_37 HRGMv2_3247_37_10 7928 9667 + 3.A.1.106.2
TF HRGMv2_3247_37 HRGMv2_3247_37_11 9701 10126 + Rrf2
peptidase HRGMv2_3247_37 HRGMv2_3247_37_12 10189 12141 + C39.UPW
TC HRGMv2_3247_37 HRGMv2_3247_37_13 12750 14033 + 2.A.26.1.6
Gene ID: HRGMv2_3247_37_4
Type: CAZyme
Location: 1279 - 2751 (+)
Gene ID: HRGMv2_3247_37_5
Type: pfam
Location: 2939 - 3850 (+)
Gene ID: HRGMv2_3247_37_6
Type:
Location: 3920 - 5740 (+)
Gene ID: HRGMv2_3247_37_7
Type: TC
Location: 5981 - 6367 (+)
Gene ID: HRGMv2_3247_37_8
Type: TF
Location: 6629 - 7150 (+)
Gene ID: HRGMv2_3247_37_9
Type: pfam
Location: 7162 - 7926 (+)
Gene ID: HRGMv2_3247_37_10
Type: TC
Location: 7928 - 9667 (+)
Gene ID: HRGMv2_3247_37_11
Type: TF
Location: 9701 - 10126 (+)
Gene ID: HRGMv2_3247_37_12
Type: peptidase
Location: 10189 - 12141 (+)
Gene ID: HRGMv2_3247_37_13
Type: TC
Location: 12750 - 14033 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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