Cluster: HRGMv2_3247_CGC3
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3247
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3247_19 | HRGMv2_3247_19_5 | 4357 | 5469 | - | 2.A.103.1.3 |
| pfam | HRGMv2_3247_19 | HRGMv2_3247_19_6 | 5456 | 8353 | - | Transpeptidase | Transpeptidase | PBP_dimer |
| pfam | HRGMv2_3247_19 | HRGMv2_3247_19_7 | 8381 | 8866 | - | MreD |
| TC | HRGMv2_3247_19 | HRGMv2_3247_19_8 | 8875 | 9756 | - | 9.B.157.1.1 |
| TC | HRGMv2_3247_19 | HRGMv2_3247_19_9 | 9769 | 10818 | - | 1.A.33.1.5 |
| pfam | HRGMv2_3247_19 | HRGMv2_3247_19_10 | 10977 | 11663 | - | RadC | UPF0758_N |
| TC | HRGMv2_3247_19 | HRGMv2_3247_19_11 | 11872 | 12750 | - | 3.D.6.1.2 |
| TC | HRGMv2_3247_19 | HRGMv2_3247_19_12 | 12766 | 13341 | - | 3.D.6.1.2 |
| TC | HRGMv2_3247_19 | HRGMv2_3247_19_13 | 13355 | 13948 | - | 3.D.6.1.2 |
| TC | HRGMv2_3247_19 | HRGMv2_3247_19_14 | 13960 | 14526 | - | 3.D.6.1.2 |
| TC | HRGMv2_3247_19 | HRGMv2_3247_19_15 | 14526 | 15512 | - | 3.D.6.1.2 |
| TC | HRGMv2_3247_19 | HRGMv2_3247_19_16 | 15531 | 16874 | - | 3.D.6.1.2 |
| TC | HRGMv2_3247_19 | HRGMv2_3247_19_17 | 17311 | 18720 | - | 3.A.7.14.2 |
| STP | HRGMv2_3247_19 | HRGMv2_3247_19_18 | 19322 | 19534 | - | HMA |
| CAZyme | HRGMv2_3247_19 | HRGMv2_3247_19_19 | 19563 | 20105 | - | GH23 |
Gene ID: HRGMv2_3247_19_5
Type: TC
Location: 4357 - 5469 (-)
Type: TC
Location: 4357 - 5469 (-)
Gene ID: HRGMv2_3247_19_6
Type: pfam
Location: 5456 - 8353 (-)
Type: pfam
Location: 5456 - 8353 (-)
Gene ID: HRGMv2_3247_19_7
Type: pfam
Location: 8381 - 8866 (-)
Type: pfam
Location: 8381 - 8866 (-)
Gene ID: HRGMv2_3247_19_8
Type: TC
Location: 8875 - 9756 (-)
Type: TC
Location: 8875 - 9756 (-)
Gene ID: HRGMv2_3247_19_9
Type: TC
Location: 9769 - 10818 (-)
Type: TC
Location: 9769 - 10818 (-)
Gene ID: HRGMv2_3247_19_10
Type: pfam
Location: 10977 - 11663 (-)
Type: pfam
Location: 10977 - 11663 (-)
Gene ID: HRGMv2_3247_19_11
Type: TC
Location: 11872 - 12750 (-)
Type: TC
Location: 11872 - 12750 (-)
Gene ID: HRGMv2_3247_19_12
Type: TC
Location: 12766 - 13341 (-)
Type: TC
Location: 12766 - 13341 (-)
Gene ID: HRGMv2_3247_19_13
Type: TC
Location: 13355 - 13948 (-)
Type: TC
Location: 13355 - 13948 (-)
Gene ID: HRGMv2_3247_19_14
Type: TC
Location: 13960 - 14526 (-)
Type: TC
Location: 13960 - 14526 (-)
Gene ID: HRGMv2_3247_19_15
Type: TC
Location: 14526 - 15512 (-)
Type: TC
Location: 14526 - 15512 (-)
Gene ID: HRGMv2_3247_19_16
Type: TC
Location: 15531 - 16874 (-)
Type: TC
Location: 15531 - 16874 (-)
Gene ID: HRGMv2_3247_19_17
Type: TC
Location: 17311 - 18720 (-)
Type: TC
Location: 17311 - 18720 (-)
Gene ID: HRGMv2_3247_19_18
Type: STP
Location: 19322 - 19534 (-)
Type: STP
Location: 19322 - 19534 (-)
Gene ID: HRGMv2_3247_19_19
Type: CAZyme
Location: 19563 - 20105 (-)
Type: CAZyme
Location: 19563 - 20105 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Peptostreptococcus
Species
Peptostreptococcus sp900759325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.