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Cluster: HRGMv2_3247_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3247_2 HRGMv2_3247_2_21 26165 27451 + 3.A.1.1.45
TC HRGMv2_3247_2 HRGMv2_3247_2_22 27530 28402 + 3.A.1.1.45
TC HRGMv2_3247_2 HRGMv2_3247_2_23 28402 29223 + 3.A.1.1.45
CAZyme HRGMv2_3247_2 HRGMv2_3247_2_24 29311 31599 + GH65
CAZyme HRGMv2_3247_2 HRGMv2_3247_2_25 31603 33264 + GH13_31
pfam HRGMv2_3247_2 HRGMv2_3247_2_26 33282 33923 + Hydrolase | HAD_2
TC HRGMv2_3247_2 HRGMv2_3247_2_27 33935 35062 + 3.A.1.1.26
Gene ID: HRGMv2_3247_2_21
Type: TC
Location: 26165 - 27451 (+)
Gene ID: HRGMv2_3247_2_22
Type: TC
Location: 27530 - 28402 (+)
Gene ID: HRGMv2_3247_2_23
Type: TC
Location: 28402 - 29223 (+)
Gene ID: HRGMv2_3247_2_24
Type: CAZyme
Location: 29311 - 31599 (+)
Gene ID: HRGMv2_3247_2_25
Type: CAZyme
Location: 31603 - 33264 (+)
Gene ID: HRGMv2_3247_2_26
Type: pfam
Location: 33282 - 33923 (+)
Gene ID: HRGMv2_3247_2_27
Type: TC
Location: 33935 - 35062 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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