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Cluster: HRGMv2_3244_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3244_11 HRGMv2_3244_11_15 14895 15974 + GT2
pfam HRGMv2_3244_11 HRGMv2_3244_11_16 16090 17004 + Collagen
pfam HRGMv2_3244_11 HRGMv2_3244_11_17 17031 18095 + Resolvase | Recombinase
TC HRGMv2_3244_11 HRGMv2_3244_11_18 18111 18725 - 3.A.1.5.3
TC HRGMv2_3244_11 HRGMv2_3244_11_19 18715 19647 - 3.A.1.5.35
TC HRGMv2_3244_11 HRGMv2_3244_11_20 19668 20543 - 3.A.1.5.2
TC HRGMv2_3244_11 HRGMv2_3244_11_21 20527 21510 - 3.A.1.5.20
TC HRGMv2_3244_11 HRGMv2_3244_11_22 21507 23117 - 3.A.1.5.20
Gene ID: HRGMv2_3244_11_15
Type: CAZyme
Location: 14895 - 15974 (+)
Gene ID: HRGMv2_3244_11_16
Type: pfam
Location: 16090 - 17004 (+)
Gene ID: HRGMv2_3244_11_17
Type: pfam
Location: 17031 - 18095 (+)
Gene ID: HRGMv2_3244_11_18
Type: TC
Location: 18111 - 18725 (-)
Gene ID: HRGMv2_3244_11_19
Type: TC
Location: 18715 - 19647 (-)
Gene ID: HRGMv2_3244_11_20
Type: TC
Location: 19668 - 20543 (-)
Gene ID: HRGMv2_3244_11_21
Type: TC
Location: 20527 - 21510 (-)
Gene ID: HRGMv2_3244_11_22
Type: TC
Location: 21507 - 23117 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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