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Cluster: HRGMv2_3244_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3244_7 HRGMv2_3244_7_29 32272 33345 + GT28
CAZyme HRGMv2_3244_7 HRGMv2_3244_7_30 33364 34425 + GT2
pfam HRGMv2_3244_7 HRGMv2_3244_7_31 34594 36561 + Helicase_C | UVR | ResIII | UvrB | UvrB_inter
pfam HRGMv2_3244_7 HRGMv2_3244_7_32 36596 39439 + UvrA_DNA-bind | UvrA_inter
TC HRGMv2_3244_7 HRGMv2_3244_7_33 39436 40359 + 2.A.7.3.67
pfam HRGMv2_3244_7 HRGMv2_3244_7_34 40325 41752 + NAPRTase | NAPRTase_N | NAPRTase_C
TC HRGMv2_3244_7 HRGMv2_3244_7_35 41770 43113 - 2.A.66.1.7
Gene ID: HRGMv2_3244_7_29
Type: CAZyme
Location: 32272 - 33345 (+)
Gene ID: HRGMv2_3244_7_30
Type: CAZyme
Location: 33364 - 34425 (+)
Gene ID: HRGMv2_3244_7_31
Type: pfam
Location: 34594 - 36561 (+)
Gene ID: HRGMv2_3244_7_32
Type: pfam
Location: 36596 - 39439 (+)
Gene ID: HRGMv2_3244_7_33
Type: TC
Location: 39436 - 40359 (+)
Gene ID: HRGMv2_3244_7_34
Type: pfam
Location: 40325 - 41752 (+)
Gene ID: HRGMv2_3244_7_35
Type: TC
Location: 41770 - 43113 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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