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Cluster: HRGMv2_3244_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3244_4 HRGMv2_3244_4_85 90116 90862 - 3.A.1.122.7
STP HRGMv2_3244_4 HRGMv2_3244_4_86 91012 94521 - Fer4 | Fer4 | Pyr_redox_2
TC HRGMv2_3244_4 HRGMv2_3244_4_87 94537 96285 - 3.D.1.5.1
TC HRGMv2_3244_4 HRGMv2_3244_4_88 96297 96815 - 3.D.1.5.1
pfam HRGMv2_3244_4 HRGMv2_3244_4_89 96993 98060 - DNA_pol3_delta | DNA_pol3_delta_C
TC HRGMv2_3244_4 HRGMv2_3244_4_90 98125 100506 - 3.A.11.1.1
CAZyme HRGMv2_3244_4 HRGMv2_3244_4_91 100717 103794 + GT51
pfam HRGMv2_3244_4 HRGMv2_3244_4_92 103935 104300 - SpoVAC_SpoVAEB
TC HRGMv2_3244_4 HRGMv2_3244_4_93 104322 105371 - 9.A.11.1.1
TC HRGMv2_3244_4 HRGMv2_3244_4_94 105394 105864 - 9.A.11.1.1
Gene ID: HRGMv2_3244_4_85
Type: TC
Location: 90116 - 90862 (-)
Gene ID: HRGMv2_3244_4_86
Type: STP
Location: 91012 - 94521 (-)
Gene ID: HRGMv2_3244_4_87
Type: TC
Location: 94537 - 96285 (-)
Gene ID: HRGMv2_3244_4_88
Type: TC
Location: 96297 - 96815 (-)
Gene ID: HRGMv2_3244_4_89
Type: pfam
Location: 96993 - 98060 (-)
Gene ID: HRGMv2_3244_4_90
Type: TC
Location: 98125 - 100506 (-)
Gene ID: HRGMv2_3244_4_91
Type: CAZyme
Location: 100717 - 103794 (+)
Gene ID: HRGMv2_3244_4_92
Type: pfam
Location: 103935 - 104300 (-)
Gene ID: HRGMv2_3244_4_93
Type: TC
Location: 104322 - 105371 (-)
Gene ID: HRGMv2_3244_4_94
Type: TC
Location: 105394 - 105864 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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