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Cluster: HRGMv2_3244_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3244_1 HRGMv2_3244_1_215 216848 220645 - PL12
CAZyme HRGMv2_3244_1 HRGMv2_3244_1_216 220642 225528 - GT4
TC HRGMv2_3244_1 HRGMv2_3244_1_217 225530 226279 - 3.A.1.103.1
NULL(UNKNOWN) HRGMv2_3244_1 HRGMv2_3244_1_218 226279 227055 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3244_1 HRGMv2_3244_1_219 227055 229559 - GT2
pfam HRGMv2_3244_1 HRGMv2_3244_1_220 229590 230777 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_3244_1 HRGMv2_3244_1_221 230774 231511 - GT26
Gene ID: HRGMv2_3244_1_215
Type: CAZyme
Location: 216848 - 220645 (-)
Gene ID: HRGMv2_3244_1_216
Type: CAZyme
Location: 220642 - 225528 (-)
Gene ID: HRGMv2_3244_1_217
Type: TC
Location: 225530 - 226279 (-)
Gene ID: HRGMv2_3244_1_218
Type:
Location: 226279 - 227055 (-)
Gene ID: HRGMv2_3244_1_219
Type: CAZyme
Location: 227055 - 229559 (-)
Gene ID: HRGMv2_3244_1_220
Type: pfam
Location: 229590 - 230777 (-)
Gene ID: HRGMv2_3244_1_221
Type: CAZyme
Location: 230774 - 231511 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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