Cluster: HRGMv2_3244_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3244
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3244_1 | HRGMv2_3244_1_88 | 87592 | 90030 | - | 2.A.6.4.2 |
| pfam | HRGMv2_3244_1 | HRGMv2_3244_1_89 | 90185 | 90550 | - | DUF3792 |
| pfam | HRGMv2_3244_1 | HRGMv2_3244_1_90 | 90672 | 91169 | - | YajC |
| CAZyme | HRGMv2_3244_1 | HRGMv2_3244_1_91 | 91359 | 92255 | - | GH25 |
| pfam | HRGMv2_3244_1 | HRGMv2_3244_1_92 | 92363 | 93460 | - | Aldo_ket_red | Fer4_8 | Fer4_9 | Fer4_17 |
| TC | HRGMv2_3244_1 | HRGMv2_3244_1_93 | 93877 | 95076 | - | 3.B.1.1.4 |
Gene ID: HRGMv2_3244_1_88
Type: TC
Location: 87592 - 90030 (-)
Type: TC
Location: 87592 - 90030 (-)
Gene ID: HRGMv2_3244_1_89
Type: pfam
Location: 90185 - 90550 (-)
Type: pfam
Location: 90185 - 90550 (-)
Gene ID: HRGMv2_3244_1_90
Type: pfam
Location: 90672 - 91169 (-)
Type: pfam
Location: 90672 - 91169 (-)
Gene ID: HRGMv2_3244_1_91
Type: CAZyme
Location: 91359 - 92255 (-)
Type: CAZyme
Location: 91359 - 92255 (-)
Gene ID: HRGMv2_3244_1_92
Type: pfam
Location: 92363 - 93460 (-)
Type: pfam
Location: 92363 - 93460 (-)
Gene ID: HRGMv2_3244_1_93
Type: TC
Location: 93877 - 95076 (-)
Type: TC
Location: 93877 - 95076 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Species
Lentihominibacter excrementavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.