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Cluster: HRGMv2_3241_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3241_7 HRGMv2_3241_7_1 209 2917 - CBM13 | CBM13 | CBM13 | CBM13 | GH25
CAZyme HRGMv2_3241_7 HRGMv2_3241_7_2 2975 3943 - GT92
TC HRGMv2_3241_7 HRGMv2_3241_7_3 3946 5379 - 2.A.66.2.16
NULL(UNKNOWN) HRGMv2_3241_7 HRGMv2_3241_7_4 5386 6303 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3241_7 HRGMv2_3241_7_5 6300 7241 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme HRGMv2_3241_7 HRGMv2_3241_7_6 7265 8152 - GT2
pfam HRGMv2_3241_7 HRGMv2_3241_7_7 8145 8747 - Hexapep | Hexapep_2
sulfatase HRGMv2_3241_7 HRGMv2_3241_7_8 8784 9932 - S1_7
CAZyme HRGMv2_3241_7 HRGMv2_3241_7_9 9945 11096 - GT4
pfam HRGMv2_3241_7 HRGMv2_3241_7_10 11225 12997 - DUF2142
CAZyme HRGMv2_3241_7 HRGMv2_3241_7_11 13051 14208 - GT4
NULL(UNKNOWN) HRGMv2_3241_7 HRGMv2_3241_7_12 14371 14580 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3241_7 HRGMv2_3241_7_13 14590 15282 - GT2
CAZyme HRGMv2_3241_7 HRGMv2_3241_7_14 15329 16273 - GT11
CAZyme HRGMv2_3241_7 HRGMv2_3241_7_15 16294 17364 - GT4
STP HRGMv2_3241_7 HRGMv2_3241_7_16 17393 18529 - Pyr_redox
pfam HRGMv2_3241_7 HRGMv2_3241_7_17 18589 19818 - EpsG
CAZyme HRGMv2_3241_7 HRGMv2_3241_7_18 19825 20580 - GT111
TC HRGMv2_3241_7 HRGMv2_3241_7_19 20588 22666 - 9.B.18.1.2
TC HRGMv2_3241_7 HRGMv2_3241_7_20 22686 24161 - 2.A.66.2.16
Gene ID: HRGMv2_3241_7_1
Type: CAZyme
Location: 209 - 2917 (-)
Gene ID: HRGMv2_3241_7_2
Type: CAZyme
Location: 2975 - 3943 (-)
Gene ID: HRGMv2_3241_7_3
Type: TC
Location: 3946 - 5379 (-)
Gene ID: HRGMv2_3241_7_4
Type:
Location: 5386 - 6303 (-)
Gene ID: HRGMv2_3241_7_5
Type: pfam
Location: 6300 - 7241 (-)
Gene ID: HRGMv2_3241_7_6
Type: CAZyme
Location: 7265 - 8152 (-)
Gene ID: HRGMv2_3241_7_7
Type: pfam
Location: 8145 - 8747 (-)
Gene ID: HRGMv2_3241_7_8
Type: sulfatase
Location: 8784 - 9932 (-)
Gene ID: HRGMv2_3241_7_9
Type: CAZyme
Location: 9945 - 11096 (-)
Gene ID: HRGMv2_3241_7_10
Type: pfam
Location: 11225 - 12997 (-)
Gene ID: HRGMv2_3241_7_11
Type: CAZyme
Location: 13051 - 14208 (-)
Gene ID: HRGMv2_3241_7_12
Type:
Location: 14371 - 14580 (+)
Gene ID: HRGMv2_3241_7_13
Type: CAZyme
Location: 14590 - 15282 (-)
Gene ID: HRGMv2_3241_7_14
Type: CAZyme
Location: 15329 - 16273 (-)
Gene ID: HRGMv2_3241_7_15
Type: CAZyme
Location: 16294 - 17364 (-)
Gene ID: HRGMv2_3241_7_16
Type: STP
Location: 17393 - 18529 (-)
Gene ID: HRGMv2_3241_7_17
Type: pfam
Location: 18589 - 19818 (-)
Gene ID: HRGMv2_3241_7_18
Type: CAZyme
Location: 19825 - 20580 (-)
Gene ID: HRGMv2_3241_7_19
Type: TC
Location: 20588 - 22666 (-)
Gene ID: HRGMv2_3241_7_20
Type: TC
Location: 22686 - 24161 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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