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Cluster: HRGMv2_3241_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3241_5 HRGMv2_3241_5_109 122314 123837 - GT4
TC HRGMv2_3241_5 HRGMv2_3241_5_110 123856 126189 - 3.A.5.10.1
pfam HRGMv2_3241_5 HRGMv2_3241_5_111 126186 126635 - Sec-ASP3
TC HRGMv2_3241_5 HRGMv2_3241_5_112 126637 128130 - 3.A.5.10.1
TC HRGMv2_3241_5 HRGMv2_3241_5_113 128096 129706 - 3.A.5.10.1
TC HRGMv2_3241_5 HRGMv2_3241_5_114 129728 130921 - 3.A.5.2.1
Gene ID: HRGMv2_3241_5_109
Type: CAZyme
Location: 122314 - 123837 (-)
Gene ID: HRGMv2_3241_5_110
Type: TC
Location: 123856 - 126189 (-)
Gene ID: HRGMv2_3241_5_111
Type: pfam
Location: 126186 - 126635 (-)
Gene ID: HRGMv2_3241_5_112
Type: TC
Location: 126637 - 128130 (-)
Gene ID: HRGMv2_3241_5_113
Type: TC
Location: 128096 - 129706 (-)
Gene ID: HRGMv2_3241_5_114
Type: TC
Location: 129728 - 130921 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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