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Cluster: HRGMv2_3241_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3241_3 HRGMv2_3241_3_177 193840 195531 + 9.B.106.2.2
pfam HRGMv2_3241_3 HRGMv2_3241_3_178 195562 196431 + MMR_HSR1 | RsgA_GTPase | RsgA_N
pfam HRGMv2_3241_3 HRGMv2_3241_3_179 196419 197075 + Ribul_P_3_epim
CAZyme HRGMv2_3241_3 HRGMv2_3241_3_180 197259 200897 - GT51
TC HRGMv2_3241_3 HRGMv2_3241_3_181 201172 203577 + 3.A.11.1.3
Gene ID: HRGMv2_3241_3_177
Type: TC
Location: 193840 - 195531 (+)
Gene ID: HRGMv2_3241_3_178
Type: pfam
Location: 195562 - 196431 (+)
Gene ID: HRGMv2_3241_3_179
Type: pfam
Location: 196419 - 197075 (+)
Gene ID: HRGMv2_3241_3_180
Type: CAZyme
Location: 197259 - 200897 (-)
Gene ID: HRGMv2_3241_3_181
Type: TC
Location: 201172 - 203577 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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