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Cluster: HRGMv2_3241_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3241_3 HRGMv2_3241_3_25 28635 29597 + 9.B.146.1.6
pfam HRGMv2_3241_3 HRGMv2_3241_3_26 29649 31073 + Mur_ligase_C | Mur_ligase_M | MurD-like_N
TC HRGMv2_3241_3 HRGMv2_3241_3_27 31106 32347 + 2.A.103.1.3
CAZyme HRGMv2_3241_3 HRGMv2_3241_3_28 32344 33450 + GT28
Gene ID: HRGMv2_3241_3_25
Type: TC
Location: 28635 - 29597 (+)
Gene ID: HRGMv2_3241_3_26
Type: pfam
Location: 29649 - 31073 (+)
Gene ID: HRGMv2_3241_3_27
Type: TC
Location: 31106 - 32347 (+)
Gene ID: HRGMv2_3241_3_28
Type: CAZyme
Location: 32344 - 33450 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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