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Cluster: HRGMv2_3241_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3241_8 HRGMv2_3241_8_15 20367 23024 - 3.A.3.2.21
STP HRGMv2_3241_8 HRGMv2_3241_8_16 23352 25007 - HATPase_c | HisKA
TF HRGMv2_3241_8 HRGMv2_3241_8_17 24997 25719 - Trans_reg_C
CAZyme HRGMv2_3241_8 HRGMv2_3241_8_18 25830 26630 - CE4
CAZyme HRGMv2_3241_8 HRGMv2_3241_8_19 26620 27792 - GT28
Gene ID: HRGMv2_3241_8_15
Type: TC
Location: 20367 - 23024 (-)
Gene ID: HRGMv2_3241_8_16
Type: STP
Location: 23352 - 25007 (-)
Gene ID: HRGMv2_3241_8_17
Type: TF
Location: 24997 - 25719 (-)
Gene ID: HRGMv2_3241_8_18
Type: CAZyme
Location: 25830 - 26630 (-)
Gene ID: HRGMv2_3241_8_19
Type: CAZyme
Location: 26620 - 27792 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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