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Cluster: HRGMv2_3240_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3240_3 HRGMv2_3240_3_211 246514 248037 - GT4
TC HRGMv2_3240_3 HRGMv2_3240_3_212 248055 250388 - 3.A.5.10.1
pfam HRGMv2_3240_3 HRGMv2_3240_3_213 250385 250861 - Sec-ASP3
TC HRGMv2_3240_3 HRGMv2_3240_3_214 250836 252329 - 3.A.5.10.1
TC HRGMv2_3240_3 HRGMv2_3240_3_215 252295 253905 - 3.A.5.10.1
TC HRGMv2_3240_3 HRGMv2_3240_3_216 253927 255120 - 3.A.5.2.1
Gene ID: HRGMv2_3240_3_211
Type: CAZyme
Location: 246514 - 248037 (-)
Gene ID: HRGMv2_3240_3_212
Type: TC
Location: 248055 - 250388 (-)
Gene ID: HRGMv2_3240_3_213
Type: pfam
Location: 250385 - 250861 (-)
Gene ID: HRGMv2_3240_3_214
Type: TC
Location: 250836 - 252329 (-)
Gene ID: HRGMv2_3240_3_215
Type: TC
Location: 252295 - 253905 (-)
Gene ID: HRGMv2_3240_3_216
Type: TC
Location: 253927 - 255120 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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