Cluster: HRGMv2_3240_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3240
- CGC Family ID: CGCFAM_03744
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3240_14 | HRGMv2_3240_14_31 | 36944 | 39268 | + | 3.A.1.135.6 |
| TC | HRGMv2_3240_14 | HRGMv2_3240_14_32 | 39268 | 41145 | + | 3.A.1.135.6 |
| NULL(UNKNOWN) | HRGMv2_3240_14 | HRGMv2_3240_14_33 | 41496 | 41813 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3240_14 | HRGMv2_3240_14_34 | 41966 | 44440 | - | GT35 |
| CAZyme | HRGMv2_3240_14 | HRGMv2_3240_14_35 | 44471 | 46120 | - | GT5 |
| CAZyme | HRGMv2_3240_14 | HRGMv2_3240_14_36 | 46412 | 48406 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_3240_14 | HRGMv2_3240_14_37 | 48421 | 49608 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_3240_14 | HRGMv2_3240_14_38 | 49629 | 50756 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_3240_14 | HRGMv2_3240_14_39 | 50817 | 52790 | + | GH13_39 |
| pfam | HRGMv2_3240_14 | HRGMv2_3240_14_40 | 52828 | 54546 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_3240_14 | HRGMv2_3240_14_41 | 54578 | 56152 | - | GH77 |
Gene ID: HRGMv2_3240_14_31
Type: TC
Location: 36944 - 39268 (+)
Type: TC
Location: 36944 - 39268 (+)
Gene ID: HRGMv2_3240_14_32
Type: TC
Location: 39268 - 41145 (+)
Type: TC
Location: 39268 - 41145 (+)
Gene ID: HRGMv2_3240_14_33
Type:
Location: 41496 - 41813 (+)
Type:
Location: 41496 - 41813 (+)
Gene ID: HRGMv2_3240_14_34
Type: CAZyme
Location: 41966 - 44440 (-)
Type: CAZyme
Location: 41966 - 44440 (-)
Gene ID: HRGMv2_3240_14_35
Type: CAZyme
Location: 44471 - 46120 (-)
Type: CAZyme
Location: 44471 - 46120 (-)
Gene ID: HRGMv2_3240_14_36
Type: CAZyme
Location: 46412 - 48406 (+)
Type: CAZyme
Location: 46412 - 48406 (+)
Gene ID: HRGMv2_3240_14_37
Type: pfam
Location: 48421 - 49608 (+)
Type: pfam
Location: 48421 - 49608 (+)
Gene ID: HRGMv2_3240_14_38
Type: pfam
Location: 49629 - 50756 (+)
Type: pfam
Location: 49629 - 50756 (+)
Gene ID: HRGMv2_3240_14_39
Type: CAZyme
Location: 50817 - 52790 (+)
Type: CAZyme
Location: 50817 - 52790 (+)
Gene ID: HRGMv2_3240_14_40
Type: pfam
Location: 52828 - 54546 (+)
Type: pfam
Location: 52828 - 54546 (+)
Gene ID: HRGMv2_3240_14_41
Type: CAZyme
Location: 54578 - 56152 (-)
Type: CAZyme
Location: 54578 - 56152 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Baileyella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.