dbCAN Logo

Cluster: HRGMv2_3230_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3230_10 HRGMv2_3230_10_5 3050 4309 - GT113 | GT113
TC HRGMv2_3230_10 HRGMv2_3230_10_6 4306 5769 - 2.A.66.2.16
CAZyme HRGMv2_3230_10 HRGMv2_3230_10_7 5738 6820 - GT2
NULL(UNKNOWN) HRGMv2_3230_10 HRGMv2_3230_10_8 6817 7476 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3230_10 HRGMv2_3230_10_9 7592 8413 - CE4
pfam HRGMv2_3230_10 HRGMv2_3230_10_10 8715 14135 + LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5 | LRR_5
pfam HRGMv2_3230_10 HRGMv2_3230_10_11 14268 14876 - His_Phos_1
TC HRGMv2_3230_10 HRGMv2_3230_10_12 15195 15758 + 3.A.1.25.2
pfam HRGMv2_3230_10 HRGMv2_3230_10_13 15924 16427 + PNPOx_N | Pyridox_ox_2
TC HRGMv2_3230_10 HRGMv2_3230_10_14 16940 18199 + 9.A.40.2.4
TC HRGMv2_3230_10 HRGMv2_3230_10_15 18196 20976 + 3.A.5.1.3
Gene ID: HRGMv2_3230_10_5
Type: CAZyme
Location: 3050 - 4309 (-)
Gene ID: HRGMv2_3230_10_6
Type: TC
Location: 4306 - 5769 (-)
Gene ID: HRGMv2_3230_10_7
Type: CAZyme
Location: 5738 - 6820 (-)
Gene ID: HRGMv2_3230_10_8
Type:
Location: 6817 - 7476 (-)
Gene ID: HRGMv2_3230_10_9
Type: CAZyme
Location: 7592 - 8413 (-)
Gene ID: HRGMv2_3230_10_10
Type: pfam
Location: 8715 - 14135 (+)
Gene ID: HRGMv2_3230_10_11
Type: pfam
Location: 14268 - 14876 (-)
Gene ID: HRGMv2_3230_10_12
Type: TC
Location: 15195 - 15758 (+)
Gene ID: HRGMv2_3230_10_13
Type: pfam
Location: 15924 - 16427 (+)
Gene ID: HRGMv2_3230_10_14
Type: TC
Location: 16940 - 18199 (+)
Gene ID: HRGMv2_3230_10_15
Type: TC
Location: 18196 - 20976 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List