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Cluster: HRGMv2_3229_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3229_37 HRGMv2_3229_37_1 686 1225 - 2.A.87.3.1
pfam HRGMv2_3229_37 HRGMv2_3229_37_2 1239 1601 - NusG_II
pfam HRGMv2_3229_37 HRGMv2_3229_37_3 1629 2675 + ApbE
CAZyme HRGMv2_3229_37 HRGMv2_3229_37_4 2677 3690 + GT2
TC HRGMv2_3229_37 HRGMv2_3229_37_5 3662 6340 + 9.B.144.1.5
TF HRGMv2_3229_37 HRGMv2_3229_37_6 6287 7672 - GntR
pfam HRGMv2_3229_37 HRGMv2_3229_37_7 7871 8698 + DHquinase_I
TC HRGMv2_3229_37 HRGMv2_3229_37_8 8770 9609 + 3.A.1.26.7
TC HRGMv2_3229_37 HRGMv2_3229_37_9 9594 10445 + 3.A.1.26.7
TC HRGMv2_3229_37 HRGMv2_3229_37_10 10442 11242 + 3.A.1.25.4
Gene ID: HRGMv2_3229_37_1
Type: TC
Location: 686 - 1225 (-)
Gene ID: HRGMv2_3229_37_2
Type: pfam
Location: 1239 - 1601 (-)
Gene ID: HRGMv2_3229_37_3
Type: pfam
Location: 1629 - 2675 (+)
Gene ID: HRGMv2_3229_37_4
Type: CAZyme
Location: 2677 - 3690 (+)
Gene ID: HRGMv2_3229_37_5
Type: TC
Location: 3662 - 6340 (+)
Gene ID: HRGMv2_3229_37_6
Type: TF
Location: 6287 - 7672 (-)
Gene ID: HRGMv2_3229_37_7
Type: pfam
Location: 7871 - 8698 (+)
Gene ID: HRGMv2_3229_37_8
Type: TC
Location: 8770 - 9609 (+)
Gene ID: HRGMv2_3229_37_9
Type: TC
Location: 9594 - 10445 (+)
Gene ID: HRGMv2_3229_37_10
Type: TC
Location: 10442 - 11242 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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