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Cluster: HRGMv2_3229_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3229_23 HRGMv2_3229_23_16 15276 15770 + 9.A.11.1.1
TC HRGMv2_3229_23 HRGMv2_3229_23_17 15781 16914 + 9.A.11.1.1
pfam HRGMv2_3229_23 HRGMv2_3229_23_18 16915 17274 + SpoVAC_SpoVAEB
CAZyme HRGMv2_3229_23 HRGMv2_3229_23_19 17412 20582 - GT51
NULL(UNKNOWN) HRGMv2_3229_23 HRGMv2_3229_23_20 21352 21861 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3229_23 HRGMv2_3229_23_21 21858 24452 + 3.A.11.1.1
pfam HRGMv2_3229_23 HRGMv2_3229_23_22 24483 25544 + DNA_pol3_delta | DNA_pol3_delta_C
TC HRGMv2_3229_23 HRGMv2_3229_23_23 25897 26415 + 3.D.1.5.1
TC HRGMv2_3229_23 HRGMv2_3229_23_24 26427 28178 + 3.D.1.5.1
Gene ID: HRGMv2_3229_23_16
Type: TC
Location: 15276 - 15770 (+)
Gene ID: HRGMv2_3229_23_17
Type: TC
Location: 15781 - 16914 (+)
Gene ID: HRGMv2_3229_23_18
Type: pfam
Location: 16915 - 17274 (+)
Gene ID: HRGMv2_3229_23_19
Type: CAZyme
Location: 17412 - 20582 (-)
Gene ID: HRGMv2_3229_23_20
Type:
Location: 21352 - 21861 (+)
Gene ID: HRGMv2_3229_23_21
Type: TC
Location: 21858 - 24452 (+)
Gene ID: HRGMv2_3229_23_22
Type: pfam
Location: 24483 - 25544 (+)
Gene ID: HRGMv2_3229_23_23
Type: TC
Location: 25897 - 26415 (+)
Gene ID: HRGMv2_3229_23_24
Type: TC
Location: 26427 - 28178 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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