Cluster: HRGMv2_3228_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3228
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3228_1 | HRGMv2_3228_1_384 | 413468 | 414415 | + | GT51 |
| pfam | HRGMv2_3228_1 | HRGMv2_3228_1_385 | 414431 | 414844 | + | DUF3785 |
| TC | HRGMv2_3228_1 | HRGMv2_3228_1_386 | 414921 | 415628 | + | 2.A.115.2.15 |
| pfam | HRGMv2_3228_1 | HRGMv2_3228_1_387 | 415758 | 416072 | - | DUF1540 | DUF1540 |
| NULL(UNKNOWN) | HRGMv2_3228_1 | HRGMv2_3228_1_388 | 416123 | 416557 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3228_1 | HRGMv2_3228_1_389 | 416886 | 418142 | + | 1.A.1.29.3 |
Gene ID: HRGMv2_3228_1_384
Type: CAZyme
Location: 413468 - 414415 (+)
Type: CAZyme
Location: 413468 - 414415 (+)
Gene ID: HRGMv2_3228_1_385
Type: pfam
Location: 414431 - 414844 (+)
Type: pfam
Location: 414431 - 414844 (+)
Gene ID: HRGMv2_3228_1_386
Type: TC
Location: 414921 - 415628 (+)
Type: TC
Location: 414921 - 415628 (+)
Gene ID: HRGMv2_3228_1_387
Type: pfam
Location: 415758 - 416072 (-)
Type: pfam
Location: 415758 - 416072 (-)
Gene ID: HRGMv2_3228_1_388
Type:
Location: 416123 - 416557 (-)
Type:
Location: 416123 - 416557 (-)
Gene ID: HRGMv2_3228_1_389
Type: TC
Location: 416886 - 418142 (+)
Type: TC
Location: 416886 - 418142 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter bartlettii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.