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Cluster: HRGMv2_3228_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3228_1 HRGMv2_3228_1_165 183921 184907 + 8.A.21.2.2
CAZyme HRGMv2_3228_1 HRGMv2_3228_1_166 185283 187256 + GH13_9
pfam HRGMv2_3228_1 HRGMv2_3228_1_167 187462 188592 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_3228_1 HRGMv2_3228_1_168 188656 189786 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_3228_1 HRGMv2_3228_1_169 189804 191240 + GT5
CAZyme HRGMv2_3228_1 HRGMv2_3228_1_170 191387 193819 + GT35
CAZyme HRGMv2_3228_1 HRGMv2_3228_1_171 193821 195701 + GH13_39
TC HRGMv2_3228_1 HRGMv2_3228_1_172 195770 196198 - 3.A.7.19.1
STP HRGMv2_3228_1 HRGMv2_3228_1_173 196379 198280 + HATPase_c | HisKA
TC HRGMv2_3228_1 HRGMv2_3228_1_174 198377 199234 + 3.A.1.132.3
Gene ID: HRGMv2_3228_1_165
Type: TC
Location: 183921 - 184907 (+)
Gene ID: HRGMv2_3228_1_166
Type: CAZyme
Location: 185283 - 187256 (+)
Gene ID: HRGMv2_3228_1_167
Type: pfam
Location: 187462 - 188592 (+)
Gene ID: HRGMv2_3228_1_168
Type: pfam
Location: 188656 - 189786 (+)
Gene ID: HRGMv2_3228_1_169
Type: CAZyme
Location: 189804 - 191240 (+)
Gene ID: HRGMv2_3228_1_170
Type: CAZyme
Location: 191387 - 193819 (+)
Gene ID: HRGMv2_3228_1_171
Type: CAZyme
Location: 193821 - 195701 (+)
Gene ID: HRGMv2_3228_1_172
Type: TC
Location: 195770 - 196198 (-)
Gene ID: HRGMv2_3228_1_173
Type: STP
Location: 196379 - 198280 (+)
Gene ID: HRGMv2_3228_1_174
Type: TC
Location: 198377 - 199234 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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