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Cluster: HRGMv2_3228_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3228_6 HRGMv2_3228_6_75 72134 72763 - 9.B.28.1.2
TC HRGMv2_3228_6 HRGMv2_3228_6_76 72836 73948 - 3.A.1.1.26
TF HRGMv2_3228_6 HRGMv2_3228_6_77 73986 75020 - LacI
CAZyme HRGMv2_3228_6 HRGMv2_3228_6_78 75081 76562 - GH77
TC HRGMv2_3228_6 HRGMv2_3228_6_79 76589 77473 - 3.A.1.1.45
TC HRGMv2_3228_6 HRGMv2_3228_6_80 77473 78318 - 3.A.1.1.45
TC HRGMv2_3228_6 HRGMv2_3228_6_81 78471 79820 - 3.A.1.1.45
CAZyme HRGMv2_3228_6 HRGMv2_3228_6_82 80068 82332 - GT35
Gene ID: HRGMv2_3228_6_75
Type: TC
Location: 72134 - 72763 (-)
Gene ID: HRGMv2_3228_6_76
Type: TC
Location: 72836 - 73948 (-)
Gene ID: HRGMv2_3228_6_77
Type: TF
Location: 73986 - 75020 (-)
Gene ID: HRGMv2_3228_6_78
Type: CAZyme
Location: 75081 - 76562 (-)
Gene ID: HRGMv2_3228_6_79
Type: TC
Location: 76589 - 77473 (-)
Gene ID: HRGMv2_3228_6_80
Type: TC
Location: 77473 - 78318 (-)
Gene ID: HRGMv2_3228_6_81
Type: TC
Location: 78471 - 79820 (-)
Gene ID: HRGMv2_3228_6_82
Type: CAZyme
Location: 80068 - 82332 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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